I just saw this and a few light bulbs went on:
(1) Steve, you responded to Eric as though you saw that AcquireStar was not on in ACP (and it was not),, however it appeared that the FocusMax log Eric passed to me in the initial post indicates that AcquireStar was being used? If not then I am a doofus in reading the FocusMax log :-) and may have confused Eric. For that I apologize.
(2) Eric - Once you switch to AcquireStar, FocusMax is in charge of the entire autofocus process including the star selection and exposure duration selection. FocusMax assumes you have selected the desired filter before asking it to do the AcquireStar-Focus. ACP does this, selecting the "reference filter" from your filter focus offsets table.
(3) The "issue of the run stopping before the first exposure" can't be diagnosed without a log from one of those runs. I can't guess, and I am not going to assume that the issue is exactly the same as it was for the run night before last.
(4) Eric, you're right to wonder why this "just started happening"... software doesn't corrode or wear out, so something changed.
(5) Eric, is this a "sample of one" or is this happening on all of your targets now? What if you try a different target (in other words some different conditions)?
(4) You have to love the responsiveness of Steve (and me) on this :-) however I'll feel much better when you're back in business imaging.